Gm29730 Pseudogene Detail

Summary

• Symbol
  Gm29730
• Name
  predicted gene, 29730

• Feature Type
  pseudogene
• IDs
  MGI:5588889
  NCBI Gene: 101055845
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:34649989-34651384 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  235 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588889	pseudogene	Chr1:34649989-34651384 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010070	pseudogene	Chr1:33014944-33016340 (-)
A/J	MGP_AJ_G0010058	pseudogene	Chr1:32218384-32219780 (-)
AKR/J	MGP_AKRJ_G0010040	pseudogene	Chr1:32626871-32628266 (-)
BALB/cJ	MGP_BALBcJ_G0010045	pseudogene	Chr1:31885645-31887040 (-)
C3H/HeJ	MGP_C3HHeJ_G0009978	pseudogene	Chr1:32831672-32833068 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010294	pseudogene	Chr1:34524957-34526352 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0009813	pseudogene	Chr1:32697595-32698981 (-)
CBA/J	MGP_CBAJ_G0009950	pseudogene	Chr1:35500910-35502304 (-)
DBA/2J	MGP_DBA2J_G0009972	pseudogene	Chr1:31573565-31574960 (-)
FVB/NJ	MGP_FVBNJ_G0009999	pseudogene	Chr1:31103940-31105336 (-)
LP/J	MGP_LPJ_G0010062	pseudogene	Chr1:33364676-33366072 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009955	pseudogene	Chr1:37748649-37750044 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010270	pseudogene	Chr1:32631663-32633059 (-)
PWK/PhJ	MGP_PWKPhJ_G0009722	pseudogene	Chr1:31290294-31291681 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009536	pseudogene	Chr1:32600979-32602385 (-)
WSB/EiJ	MGP_WSBEiJ_G0009877	pseudogene	Chr1:32612409-32613803 (-)

Homology

• Gene Tree
  Gm29730
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29730
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103521 (Evidence)
• NCBI Gene
  101055845

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103521	Ensembl Gene Model | MGI Sequence Detail	1396	C57BL/6J
transcript	ENSMUST00000192986	Ensembl | MGI Sequence Detail	1396	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;