Gm29799 Pseudogene Detail

Summary

• Symbol
  Gm29799
• Name
  predicted gene, 29799

• Feature Type
  pseudogene
• IDs
  MGI:5588958
  NCBI Gene: 101056211
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:140364428-140364914 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588958	pseudogene	Chr7:140364428-140364914 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014030	pseudogene	Chr7:145914141-145914627 (+)
A/J	MGP_AJ_G0014048	pseudogene	Chr7:141766556-141767042 (+)
AKR/J	MGP_AKRJ_G0013982	pseudogene	Chr7:145655382-145655868 (+)
BALB/cJ	MGP_BALBcJ_G0014006	pseudogene	Chr7:141493353-141493839 (+)
C3H/HeJ	MGP_C3HHeJ_G0013839	pseudogene	Chr7:145408574-145409060 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014438	pseudogene	Chr7:151251526-151252012 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012294	pseudogene	Chr7:142981471-142981948 (+)
CAST/EiJ	MGP_CASTEiJ_G0013497	pseudogene	Chr7:137707309-137707784 (+)
CBA/J	MGP_CBAJ_G0013820	pseudogene	Chr7:156379474-156379961 (+)
DBA/2J	MGP_DBA2J_G0013898	pseudogene	Chr7:139705106-139705592 (+)
FVB/NJ	MGP_FVBNJ_G0013898	pseudogene	Chr7:139615821-139616307 (+)
LP/J	MGP_LPJ_G0013980	pseudogene	Chr7:147410806-147411292 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013924	pseudogene	Chr7:157051066-157051552 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014408	pseudogene	Chr7:144637899-144638385 (+)
PWK/PhJ	MGP_PWKPhJ_G0013312	pseudogene	Chr7:132963688-132964162 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013083	pseudogene	Chr7:131455589-131456066 (+)
WSB/EiJ	MGP_WSBEiJ_G0013556	pseudogene	Chr7:145550886-145551372 (+)

Homology

• Gene Tree
  Gm29799
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm29799
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107816 (Evidence)
• NCBI Gene
  101056211

Representative Sequences			Length	Strain/Species
genomic	101056211	NCBI Gene Model | MGI Sequence Detail	487	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
• Latest
  J:187438 Peters J, et al., Identification and characterisation of imprinted genes in the mouse. Brief Funct Genomic Proteomic. 2004 Feb;2(4):320-33