Gm30438 Gene Detail

Summary

• Symbol
  Gm30438
• Name
  predicted gene, 30438

• Feature Type
  lncRNA gene
• IDs
  MGI:5589597
  NCBI Gene: 102632339
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr14:67396612-67426661 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  995 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589597	lncRNA gene	Chr14:67396612-67426661 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm30438
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  14

• NCBI Gene
  102632339

Representative Sequences			Length	Strain/Species
genomic	102632339	NCBI Gene Model | MGI Sequence Detail	30050	C57BL/6J
transcript	XR_874734	RefSeq | MGI Sequence Detail	3725	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm30438:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr126323	Chr14:67396689-67396706 (+)	86 bp
Tssr126324	Chr14:67414270-67414292 (+)	17,669 bp
Tssr126325	Chr14:67414324-67414326 (+)	17,713 bp