Gm30524 Gene Detail

Summary

• Symbol
  Gm30524
• Name
  predicted gene, 30524

• Feature Type
  lncRNA gene
• IDs
  MGI:5589683
  NCBI Gene: 102632457
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:140901335-140989860 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2725 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589683	lncRNA gene	Chr6:140901335-141168778 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007086	lincRNA gene	Chr6:145705650-145795304 (+)
A/J	MGP_AJ_G0007083	lincRNA gene	Chr6:139921877-140009129 (+)
AKR/J	MGP_AKRJ_G0007051	lincRNA gene	Chr6:144122693-144206398 (+)
BALB/cJ	MGP_BALBcJ_G0007058	lincRNA gene	Chr6:139763270-139847656 (+)
C3H/HeJ	MGP_C3HHeJ_G0007003	lincRNA gene	Chr6:144194915-144279137 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007223	lincRNA gene	Chr6:149690799-149775785 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006449	lincRNA gene	Chr6:138795351-138874423 (+)
CAST/EiJ	MGP_CASTEiJ_G0006910	lincRNA gene	Chr6:143733795-143819488 (+)
CBA/J	MGP_CBAJ_G0006983	lincRNA gene	Chr6:155397846-155488292 (+)
DBA/2J	MGP_DBA2J_G0007005	lincRNA gene	Chr6:138775354-138861517 (+)
FVB/NJ	MGP_FVBNJ_G0007028	lincRNA gene	Chr6:137569658-137649246 (+)
LP/J	MGP_LPJ_G0007089	lincRNA gene	Chr6:145834794-145920381 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007008	lincRNA gene	Chr6:159247063-159340108 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007230	lincRNA gene	Chr6:143951229-144034449 (+)
PWK/PhJ	MGP_PWKPhJ_G0006854	lincRNA gene	Chr6:137276590-137359231 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006764	lincRNA gene	Chr6:142168464-142255671 (+)
WSB/EiJ	MGP_WSBEiJ_G0006970	lincRNA gene	Chr6:144607858-144691029 (+)

Homology

• Gene Tree
  Gm30524
  

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  7

• Ensembl
  ENSMUSG00000107638 (Evidence)
• NCBI Gene
  102632457

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107638	Ensembl Gene Model | MGI Sequence Detail	88526	C57BL/6J
transcript	ENSMUST00000204271	Ensembl | MGI Sequence Detail	2300	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;