Gm30652 Pseudogene Detail

Summary

• Symbol
  Gm30652
• Name
  predicted gene, 30652

• Feature Type
  pseudogene
• IDs
  MGI:5589811
  NCBI Gene: 102632626
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:5617328-5617757 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589811	pseudogene	Chr5:5617328-5617757 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012954	pseudogene	Chr5:2469208-2469637 (+)
A/J	MGP_AJ_G0012941	pseudogene	Chr5:2377613-2378042 (+)
AKR/J	MGP_AKRJ_G0012908	pseudogene	Chr5:2420067-2420496 (+)
BALB/cJ	MGP_BALBcJ_G0012920	pseudogene	Chr5:2577167-2577596 (+)
C3H/HeJ	MGP_C3HHeJ_G0012771	pseudogene	Chr5:2614799-2615228 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013278	pseudogene	Chr5:2859114-2859543 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011489	pseudogene	Chr5:2452780-2453239 (+)
CAST/EiJ	MGP_CASTEiJ_G0012509	pseudogene	Chr5:2571552-2572014 (+)
CBA/J	MGP_CBAJ_G0012742	pseudogene	Chr5:2838368-2838797 (+)
DBA/2J	MGP_DBA2J_G0012816	pseudogene	Chr5:2522182-2522611 (+)
FVB/NJ	MGP_FVBNJ_G0012818	pseudogene	Chr5:2374760-2375189 (+)
LP/J	MGP_LPJ_G0012885	pseudogene	Chr5:2565255-2565684 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012833	pseudogene	Chr5:2763454-2763916 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013276	pseudogene	Chr5:2475436-2475865 (+)
PWK/PhJ	MGP_PWKPhJ_G0012326	pseudogene	Chr5:2447040-2447620 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012141	pseudogene	Chr5:2771383-2771844 (+)
WSB/EiJ	MGP_WSBEiJ_G0012543	pseudogene	Chr5:2503919-2504348 (+)

Homology

• Gene Tree
  Gm30652
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000104716 (Evidence)
• NCBI Gene
  102632626

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104716	Ensembl Gene Model | MGI Sequence Detail	430	C57BL/6J
transcript	ENSMUST00000199103	Ensembl | MGI Sequence Detail	430	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;