Gm30781 Gene Detail

Summary

• Symbol
  Gm30781
• Name
  predicted gene, 30781
• Synonyms
  Gm44019

• Feature Type
  lncRNA gene
• IDs
  MGI:5589940
  NCBI Gene: 102632803
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:48775214-48775760 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589940	lncRNA gene	Chr6:48775024-48775782 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006973	lincRNA gene	Chr6:56984793-56985351 (+)
A/J	MGP_AJ_G0006946	lincRNA gene	Chr6:45589979-45590525 (-)
AKR/J	MGP_AKRJ_G0006916	lincRNA gene	Chr6:47199715-47200261 (-)
BALB/cJ	MGP_BALBcJ_G0006923	lincRNA gene	Chr6:45923826-45924372 (-)
C3H/HeJ	MGP_C3HHeJ_G0006867	lincRNA gene	Chr6:47202192-47202738 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007085	lincRNA gene	Chr6:48888944-48889490 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006332	lincRNA gene	Chr6:43212574-43213121 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0006849	lincRNA gene	Chr6:50907743-50908289 (-)
DBA/2J	MGP_DBA2J_G0006869	lincRNA gene	Chr6:45506375-45506921 (-)
FVB/NJ	MGP_FVBNJ_G0006892	lincRNA gene	Chr6:45139466-45140012 (-)
LP/J	MGP_LPJ_G0007001	lincRNA gene	Chr6:83637279-83637878 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006872	lincRNA gene	Chr6:53715361-53715907 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007089	lincRNA gene	Chr6:47059446-47059992 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm30781
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000108130 (Evidence)
• NCBI Gene
  102632803

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108130	Ensembl Gene Model | MGI Sequence Detail	547	C57BL/6J
transcript	ENSMUST00000204743	Ensembl | MGI Sequence Detail	216	Not Applicable

Other
Accession IDs

MGI:5690411

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;