Gm30932 Gene Detail

Summary

• Symbol
  Gm30932
• Name
  predicted gene, 30932

• Feature Type
  lncRNA gene
• IDs
  MGI:5590091
  NCBI Gene: 102632999
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr1:190326485-190329316 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590091	lncRNA gene	Chr1:190326485-190336745 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005082	lincRNA gene	Chr1:197588109-197598331 (+)
A/J	MGP_AJ_G0005065	lincRNA gene	Chr1:189492528-189502750 (+)
AKR/J	MGP_AKRJ_G0005043	lincRNA gene	Chr1:195096384-195106606 (+)
BALB/cJ	MGP_BALBcJ_G0005046	lincRNA gene	Chr1:190173767-190183989 (+)
C3H/HeJ	MGP_C3HHeJ_G0004995	lincRNA gene	Chr1:195959927-195970149 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005196	lincRNA gene	Chr1:203892175-203902397 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004603	lincRNA gene	Chr1:180395350-180405879 (+)
CAST/EiJ	MGP_CASTEiJ_G0004942	lincRNA gene	Chr1:195527105-195537301 (+)
CBA/J	MGP_CBAJ_G0004985	lincRNA gene	Chr1:211444147-211454369 (+)
DBA/2J	MGP_DBA2J_G0005004	lincRNA gene	Chr1:188222858-188233080 (+)
FVB/NJ	MGP_FVBNJ_G0005025	lincRNA gene	Chr1:186347153-186357375 (+)
LP/J	MGP_LPJ_G0005083	lincRNA gene	Chr1:198762129-198772351 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005008	lincRNA gene	Chr1:218161915-218173308 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005203	lincRNA gene	Chr1:194991499-195001721 (+)
PWK/PhJ	MGP_PWKPhJ_G0004893	lincRNA gene	Chr1:187493568-187503790 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004818	lincRNA gene	Chr1:193962126-193974917 (+)
WSB/EiJ	MGP_WSBEiJ_G0004989	lincRNA gene	Chr1:195195235-195205434 (+)

Homology

• Gene Tree
  Gm30932
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103963 (Evidence)
• NCBI Gene
  102632999

Representative Sequences			Length	Strain/Species
genomic	102632999	NCBI Gene Model | MGI Sequence Detail	2832	C57BL/6J
transcript	XR_373854	RefSeq | MGI Sequence Detail	591	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm30932:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr10707	Chr1:190326497-190326511 (+)	19 bp
Tssr10708	Chr1:190328732-190328751 (+)	2,257 bp
Tssr10709	Chr1:190328758-190328781 (+)	2,285 bp