Gm30990 Gene Detail

Summary

• Symbol
  Gm30990
• Name
  predicted gene, 30990

• Feature Type
  protein coding gene
• IDs
  MGI:5590149
  NCBI Gene: 102633075
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:53843729-53893035 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1665 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590149	protein coding gene	Chr19:53843729-53893035 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  102633075

Representative Sequences			Length	Strain/Species
genomic	102633075	NCBI Gene Model | MGI Sequence Detail	49307	C57BL/6J
transcript	XM_036161742	RefSeq | MGI Sequence Detail	6957	C57BL/6J
polypeptide	XP_036017635	RefSeq | MGI Sequence Detail	407	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm30990:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5551	Chr19:53863249-53863256 (-)	29,782 bp