Gm31251 Gene Detail

Summary

• Symbol
  Gm31251
• Name
  predicted gene, 31251

• Feature Type
  lncRNA gene
• IDs
  MGI:5590410
  NCBI Gene: 102633419
• Alliance
  gene page
• Transcription Start Sites
  9 TSS

Location &
Maps

• Sequence Map
  Chr14:55216850-55229058 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  445 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590410	lncRNA gene	Chr14:55213460-55229058 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm31251
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31251
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  2

• Ensembl
  ENSMUSG00000115610 (Evidence)
• NCBI Gene
  102633419

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115610	Ensembl Gene Model | MGI Sequence Detail	12209	C57BL/6J
transcript	ENSMUST00000228715	Ensembl | MGI Sequence Detail	1248	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm31251:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125733	Chr14:55219627-55219633 (+)	2,780 bp
Tssr125734	Chr14:55220790-55220819 (+)	3,955 bp
Tssr125735	Chr14:55220823-55220833 (+)	3,978 bp
Tssr125736	Chr14:55221007-55221030 (+)	4,169 bp
Tssr125737	Chr14:55223961-55223978 (+)	7,120 bp
Tssr125738	Chr14:55225766-55225801 (+)	8,934 bp
Tssr125739	Chr14:55228188-55228205 (+)	11,347 bp
Tssr125740	Chr14:55228555-55228570 (+)	11,713 bp
Tssr125741	Chr14:55228723-55228736 (+)	11,880 bp