Gm31460 Gene Detail

Summary

• Symbol
  Gm31460
• Name
  predicted gene, 31460

• Feature Type
  lncRNA gene
• IDs
  MGI:5590619
  NCBI Gene: 102633699
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:98466707-98472052 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  247 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590619	lncRNA gene	Chr11:98466707-98472052 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm31460
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  12

• NCBI Gene
  102633699

Representative Sequences			Length	Strain/Species
genomic	102633699	NCBI Gene Model | MGI Sequence Detail	5346	C57BL/6J
transcript	XR_880198	RefSeq | MGI Sequence Detail	2840	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Gm31460:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr104754	Chr11:98466743-98466755 (+)	42 bp