Gm31579 Gene Detail

Summary

• Symbol
  Gm31579
• Name
  predicted gene, 31579
• Synonyms
  Gm44400

• Feature Type
  lncRNA gene
• IDs
  MGI:5590738
  NCBI Gene: 102633851
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:50886750-50887715 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590738	lncRNA gene	Chr6:50883386-50887715 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001918	unclassified gene	Chr6:50046693-50047658 (+)
A/J	MGP_AJ_G0001895	unclassified gene	Chr6:47728671-47729636 (+)
AKR/J	MGP_AKRJ_G0001882	unclassified gene	Chr6:49383617-49384583 (+)
BALB/cJ	MGP_BALBcJ_G0001892	unclassified gene	Chr6:48068857-48069823 (+)
C3H/HeJ	MGP_C3HHeJ_G0001869	unclassified gene	Chr6:49421248-49422213 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002013	unclassified gene	Chr6:51165413-51166378 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001670	unclassified gene	Chr6:45390712-45391682 (+)
CAST/EiJ	MGP_CASTEiJ_G0001836	unclassified gene	Chr6:49154191-49155160 (+)
CBA/J	MGP_CBAJ_G0001862	unclassified gene	Chr6:53325472-53326437 (+)
DBA/2J	MGP_DBA2J_G0001866	unclassified gene	Chr6:47653535-47654500 (+)
FVB/NJ	MGP_FVBNJ_G0001874	unclassified gene	Chr6:47275174-47276139 (+)
LP/J	MGP_LPJ_G0001921	unclassified gene	Chr6:50024050-50025015 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001852	unclassified gene	Chr6:56006689-56007654 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002003	unclassified gene	Chr6:49304796-49305761 (+)
PWK/PhJ	MGP_PWKPhJ_G0001799	unclassified gene	Chr6:47235660-47236625 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001761	unclassified gene	Chr6:48638174-48639138 (+)
WSB/EiJ	MGP_WSBEiJ_G0001862	unclassified gene	Chr6:49287143-49288108 (+)

Homology

• Gene Tree
  Gm31579
  

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000107488 (Evidence)
• NCBI Gene
  102633851

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107488	Ensembl Gene Model | MGI Sequence Detail	966	C57BL/6J
transcript	NR_157241	RefSeq | MGI Sequence Detail	633	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:5690792

References

• Summaries
  All 6
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;