Gm31749 Gene Detail

Summary

• Symbol
  Gm31749
• Name
  predicted gene, 31749

• Feature Type
  lncRNA gene
• IDs
  MGI:5590908
  NCBI Gene: 102634080
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:126630640-126634463 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590908	lncRNA gene	Chr7:126630640-126634463 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004506	antisense lncRNA gene	Chr7:131346576-131350399 (+)
A/J	MGP_AJ_G0004486	antisense lncRNA gene	Chr7:127859091-127862914 (+)
AKR/J	MGP_AKRJ_G0004469	antisense lncRNA gene	Chr7:131096237-131100060 (+)
BALB/cJ	MGP_BALBcJ_G0004471	antisense lncRNA gene	Chr7:127522106-127525929 (+)
C3H/HeJ	MGP_C3HHeJ_G0004420	antisense lncRNA gene	Chr7:131037590-131041413 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004621	antisense lncRNA gene	Chr7:136451082-136454905 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004076	antisense lncRNA gene	Chr7:129071552-129075502 (+)
CAST/EiJ	MGP_CASTEiJ_G0004380	antisense lncRNA gene	Chr7:122828271-122832071 (+)
CBA/J	MGP_CBAJ_G0004415	antisense lncRNA gene	Chr7:141040354-141044170 (+)
DBA/2J	MGP_DBA2J_G0004429	antisense lncRNA gene	Chr7:125832773-125836594 (+)
FVB/NJ	MGP_FVBNJ_G0004446	antisense lncRNA gene	Chr7:125684070-125687886 (+)
LP/J	MGP_LPJ_G0004510	antisense lncRNA gene	Chr7:132815847-132819670 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004435	antisense lncRNA gene	Chr7:142204713-142208532 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004620	antisense lncRNA gene	Chr7:130111042-130114858 (+)
PWK/PhJ	MGP_PWKPhJ_G0004333	antisense lncRNA gene	Chr7:118830085-118833947 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004274	antisense lncRNA gene	Chr7:116951909-116955766 (+)
WSB/EiJ	MGP_WSBEiJ_G0004419	antisense lncRNA gene	Chr7:131086637-131090454 (+)

Homology

• Gene Tree
  Gm31749
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  1
• Targeted
  3
• Genomic Mutations
  3 involving Gm31749
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108617 (Evidence)
• NCBI Gene
  102634080

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108617	Ensembl Gene Model | MGI Sequence Detail	3824	C57BL/6J
transcript	ENSMUST00000206873	Ensembl | MGI Sequence Detail	598	Not Applicable

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 7
• Earliest
  J:210018 Portmann T, et al., Behavioral abnormalities and circuit defects in the Basal Ganglia of a mouse model of 16p11.2 deletion syndrome. Cell Rep. 2014 May 22;7(4):1077-92
• Latest
  J:348233 Rusu A, et al., Day-to-day spontaneous social behaviours is quantitatively and qualitatively affected in a 16p11.2 deletion mouse model. Front Behav Neurosci. 2023;17:1294558