Gm31861 Pseudogene Detail

Summary

• Symbol
  Gm31861
• Name
  predicted gene, 31861

• Feature Type
  pseudogene
• IDs
  MGI:5591020
  NCBI Gene: 115490333
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:82219155-82219826 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  241 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591020	pseudogene	Chr6:82219155-82219826 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013567	pseudogene	Chr6:83197442-83198113 (+)
A/J	MGP_AJ_G0013551	pseudogene	Chr6:80005414-80006085 (+)
AKR/J	MGP_AKRJ_G0013512	pseudogene	Chr6:82297679-82298350 (+)
BALB/cJ	MGP_BALBcJ_G0013530	pseudogene	Chr6:80039394-80040065 (+)
C3H/HeJ	MGP_C3HHeJ_G0013405	pseudogene	Chr6:102073845-102074516 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013918	pseudogene	Chr6:85450697-85451368 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011958	pseudogene	Chr6:78420061-78420680 (+)
CAST/EiJ	MGP_CASTEiJ_G0013072	pseudogene	Chr6:82302387-82303058 (+)
CBA/J	MGP_CBAJ_G0013350	pseudogene	Chr6:88852407-88853078 (+)
DBA/2J	MGP_DBA2J_G0013430	pseudogene	Chr6:79327006-79327677 (+)
FVB/NJ	MGP_FVBNJ_G0013429	pseudogene	Chr6:78556302-78556973 (+)
LP/J	MGP_LPJ_G0013503	pseudogene	Chr6:83184225-83184896 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013440	pseudogene	Chr6:93176146-93176817 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013909	pseudogene	Chr6:82126525-82127196 (+)
PWK/PhJ	MGP_PWKPhJ_G0012877	pseudogene	Chr6:78215210-78215881 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012660	pseudogene	Chr6:80993975-80994639 (+)
WSB/EiJ	MGP_WSBEiJ_G0013123	pseudogene	Chr6:82572680-82573351 (+)

Homology

• Gene Tree
  Gm31861
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm31861
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108224 (Evidence)
• NCBI Gene
  115490333

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108224	Ensembl Gene Model | MGI Sequence Detail	672	C57BL/6J
transcript	ENSMUST00000204563	Ensembl | MGI Sequence Detail	672	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48