Gm31897 Gene Detail

Summary

• Symbol
  Gm31897
• Name
  predicted gene, 31897
• Synonyms
  Gm44728

• Feature Type
  lncRNA gene
• IDs
  MGI:5591056
  NCBI Gene: 102634273
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:126886901-126889791 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  234 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591056	lncRNA gene	Chr7:126886901-126889791 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007275	lincRNA gene	Chr7:131628997-131631705 (+)
A/J	MGP_AJ_G0007272	lincRNA gene	Chr7:128121313-128124001 (+)
AKR/J	MGP_AKRJ_G0007242	lincRNA gene	Chr7:131381514-131388036 (+)
BALB/cJ	MGP_BALBcJ_G0007250	lincRNA gene	Chr7:127798806-127804646 (+)
C3H/HeJ	MGP_C3HHeJ_G0007194	lincRNA gene	Chr7:131315028-131318418 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007420	lincRNA gene	Chr7:136739959-136744013 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006626	lincRNA gene	Chr7:129332271-129334534 (+)
CAST/EiJ	MGP_CASTEiJ_G0007096	lincRNA gene	Chr7:123113183-123118377 (+)
CBA/J	MGP_CBAJ_G0007177	lincRNA gene	Chr7:141358558-141364712 (+)
DBA/2J	MGP_DBA2J_G0007198	lincRNA gene	Chr7:126094464-126099904 (+)
FVB/NJ	MGP_FVBNJ_G0007220	lincRNA gene	Chr7:125949437-125952150 (+)
LP/J	MGP_LPJ_G0007280	lincRNA gene	Chr7:133089527-133093806 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007197	lincRNA gene	Chr7:142484670-142487974 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007423	lincRNA gene	Chr7:130396571-130399250 (+)
PWK/PhJ	MGP_PWKPhJ_G0007038	lincRNA gene	Chr7:119105037-119108653 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006947	lincRNA gene	Chr7:117233538-117236241 (+)
WSB/EiJ	MGP_WSBEiJ_G0007157	lincRNA gene	Chr7:131364119-131366870 (+)

Homology

• Gene Tree
  Gm31897
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000108760 (Evidence)
• NCBI Gene
  102634273

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108760	Ensembl Gene Model | MGI Sequence Detail	2891	C57BL/6J
transcript	ENSMUST00000206231	Ensembl | MGI Sequence Detail	604	Not Applicable

Other
Accession IDs

MGI:5753304

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm31897:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr69187	Chr7:126887373-126887397 (+)	484 bp