Gm31953 Gene Detail

Summary

• Symbol
  Gm31953
• Name
  predicted gene, 31953

• Feature Type
  lncRNA gene
• IDs
  MGI:5591112
  NCBI Gene: 102634351
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr15:30173316-30214062 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1361 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591112	lncRNA gene	Chr15:30173316-30214062 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm31953
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  102634351

Representative Sequences			Length	Strain/Species
genomic	102634351	NCBI Gene Model | MGI Sequence Detail	40747	C57BL/6J
transcript	XR_004938884	RefSeq | MGI Sequence Detail	29601	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm31953:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130918	Chr15:30173068-30173084 (+)	-240 bp
Tssr130919	Chr15:30173089-30173116 (+)	-213 bp
Tssr130920	Chr15:30173123-30173146 (+)	-181 bp
Tssr130921	Chr15:30173229-30173260 (+)	-71 bp
Tssr130922	Chr15:30184897-30184901 (+)	11,583 bp
Tssr130923	Chr15:30188105-30188110 (+)	14,792 bp