Gm32496 Gene Detail

Summary

• Symbol
  Gm32496
• Name
  predicted gene, 32496

• Feature Type
  lncRNA gene
• IDs
  MGI:5591655
  NCBI Gene: 102635065
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:8693111-8697514 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  256 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591655	lncRNA gene	Chr3:8693111-8697514 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006116	lincRNA gene	Chr3:5458047-5462450 (+)
A/J	MGP_AJ_G0006107	lincRNA gene	Chr3:5718538-5723695 (+)
AKR/J	MGP_AKRJ_G0006083	lincRNA gene	Chr3:5595254-5600747 (+)
BALB/cJ	MGP_BALBcJ_G0006083	lincRNA gene	Chr3:5435084-5440352 (+)
C3H/HeJ	MGP_C3HHeJ_G0006033	lincRNA gene	Chr3:5845315-5850371 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0006018	lincRNA gene	Chr3:5944375-5948778 (+)
DBA/2J	MGP_DBA2J_G0006038	lincRNA gene	Chr3:5308189-5314325 (+)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0006248	lincRNA gene	Chr3:5423471-5428312 (+)
PWK/PhJ	MGP_PWKPhJ_G0005915	lincRNA gene	Chr3:5504885-5509394 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm32496
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  1

• Ensembl
  ENSMUSG00000104102 (Evidence)
• NCBI Gene
  102635065

Representative Sequences			Length	Strain/Species
genomic	102635065	NCBI Gene Model | MGI Sequence Detail	4404	C57BL/6J
transcript	NR_153352	RefSeq | MGI Sequence Detail	702	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;