Gm32650 Gene Detail

Summary

• Symbol
  Gm32650
• Name
  predicted gene, 32650

• Feature Type
  lncRNA gene
• IDs
  MGI:5591809
  NCBI Gene: 102635265
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr11:83402115-83437366 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1072 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591809	lncRNA gene	Chr11:83402115-83437366 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Targeted
  1
• Transgenic
  3
• Genomic Mutations
  2 involving Gm32650
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  6

• NCBI Gene
  102635265

Representative Sequences			Length	Strain/Species
genomic	102635265	NCBI Gene Model | MGI Sequence Detail	35252	C57BL/6J
transcript	XR_880078	RefSeq | MGI Sequence Detail	3630	C57BL/6J

References

• Summaries
  All 11

  Phenotypes 9
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:287321 Seo W, et al., Runx-mediated regulation of CCL5 via antagonizing two enhancers influences immune cell function and anti-tumor immunity. Nat Commun. 2020 Mar 26;11(1):1562

TSS for Gm32650:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr103707	Chr11:83416603-83416614 (+)	14,494 bp
Tssr103708	Chr11:83416630-83416649 (+)	14,525 bp
Tssr103709	Chr11:83416781-83416806 (+)	14,679 bp
Tssr103710	Chr11:83416810-83416825 (+)	14,703 bp
Tssr103711	Chr11:83416829-83416853 (+)	14,726 bp
Tssr103712	Chr11:83423294-83423297 (+)	21,181 bp
Tssr103713	Chr11:83425909-83425935 (+)	23,807 bp