Gm32999 Gene Detail

Summary

• Symbol
  Gm32999
• Name
  predicted gene, 32999

• Feature Type
  lncRNA gene
• IDs
  MGI:5592158
  NCBI Gene: 102635737
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:165671616-165672177 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592158	lncRNA gene	Chr1:165660147-165676714 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0000694	unclassified gene	Chr1:171352804-171353365 (-)
A/J	MGP_AJ_G0000669	unclassified gene	Chr1:164374890-164375451 (-)
AKR/J	MGP_AKRJ_G0000658	unclassified gene	Chr1:169333930-169334491 (-)
BALB/cJ	MGP_BALBcJ_G0000661	unclassified gene	Chr1:164855070-164855631 (-)
C3H/HeJ	MGP_C3HHeJ_G0000648	unclassified gene	Chr1:169557815-169558376 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0000778	unclassified gene	Chr1:177105843-177106404 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000514	unclassified gene	Chr1:156248196-156248763 (-)
CAST/EiJ	MGP_CASTEiJ_G0000639	unclassified gene	Chr1:169155548-169156091 (-)
CBA/J	MGP_CBAJ_G0000638	unclassified gene	Chr1:183409405-183409966 (-)
DBA/2J	MGP_DBA2J_G0000643	unclassified gene	Chr1:163245146-163245689 (-)
FVB/NJ	MGP_FVBNJ_G0000655	unclassified gene	Chr1:161680156-161680717 (-)
LP/J	MGP_LPJ_G0000700	unclassified gene	Chr1:172415472-172416033 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000649	unclassified gene	Chr1:190868293-190868854 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000770	unclassified gene	Chr1:169201878-169202439 (-)
PWK/PhJ	MGP_PWKPhJ_G0000592	unclassified gene	Chr1:162444928-162445471 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0000566	unclassified gene	Chr1:168042450-168043016 (-)
WSB/EiJ	MGP_WSBEiJ_G0000645	unclassified gene	Chr1:169350756-169351317 (-)

Homology

• Gene Tree
  Gm32999
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm32999
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  5

• Ensembl
  ENSMUSG00000102363 (Evidence)
• NCBI Gene
  102635737

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102363	Ensembl Gene Model | MGI Sequence Detail	562	C57BL/6J
transcript	BC027659	GenBank | ENA | DDBJ | MGI Sequence Detail	1006	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;