Gm33080 Pseudogene Detail

Summary

• Symbol
  Gm33080
• Name
  predicted gene, 33080

• Feature Type
  pseudogene
• IDs
  MGI:5592239
  NCBI Gene: 102635839
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:127009992-127010163 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592239	pseudogene	Chr7:127009943-127010169 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014014	pseudogene	Chr7:131758254-131758425 (-)
A/J	MGP_AJ_G0014034	pseudogene	Chr7:128261210-128261381 (-)
AKR/J	MGP_AKRJ_G0013968	pseudogene	Chr7:131561722-131561893 (-)
BALB/cJ	MGP_BALBcJ_G0013990	pseudogene	Chr7:127906372-127906543 (-)
C3H/HeJ	MGP_C3HHeJ_G0013825	pseudogene	Chr7:131457395-131457566 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014423	pseudogene	Chr7:136898077-136898248 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012279	pseudogene	Chr7:129459042-129459206 (-)
CAST/EiJ	MGP_CASTEiJ_G0013480	pseudogene	Chr7:123253873-123254044 (-)
CBA/J	MGP_CBAJ_G0013806	pseudogene	Chr7:141524455-141524626 (-)
DBA/2J	MGP_DBA2J_G0013883	pseudogene	Chr7:126235715-126235886 (-)
FVB/NJ	MGP_FVBNJ_G0013884	pseudogene	Chr7:126078839-126079010 (-)
LP/J	MGP_LPJ_G0013963	pseudogene	Chr7:133236875-133237046 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013910	pseudogene	Chr7:142637959-142638130 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014389	pseudogene	Chr7:130541775-130541946 (-)
PWK/PhJ	MGP_PWKPhJ_G0013294	pseudogene	Chr7:119240619-119240790 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013067	pseudogene	Chr7:117368781-117368953 (-)
WSB/EiJ	MGP_WSBEiJ_G0013541	pseudogene	Chr7:131523669-131523840 (-)

Homology

• Gene Tree
  Gm33080
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000108663 (Evidence)
• NCBI Gene
  102635839

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108663	Ensembl Gene Model | MGI Sequence Detail	172	C57BL/6J
transcript	ENSMUST00000205429	Ensembl | MGI Sequence Detail	172	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;