Gm33742 Gene Detail

Summary

• Symbol
  Gm33742
• Name
  predicted gene, 33742

• Feature Type
  lncRNA gene
• IDs
  MGI:5592901
  NCBI Gene: 102636760
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr11:86707207-86759442 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1303 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592901	lncRNA gene	Chr11:86707207-86759442 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  18
• Chemically induced (other)
  1
• Gene trapped
  16
• Targeted
  1
• Genomic Mutations
  2 involving Gm33742
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  2

• NCBI Gene
  102636760

Representative Sequences			Length	Strain/Species
genomic	102636760	NCBI Gene Model | MGI Sequence Detail	52236	C57BL/6J
transcript	AK035409	GenBank | ENA | DDBJ | MGI Sequence Detail	3668	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 14

  Phenotypes 11
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Gm33742:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr109929	Chr11:86758471-86758486 (-)	963 bp
Tssr109928	Chr11:86750905-86750933 (-)	8,523 bp
Tssr109927	Chr11:86729548-86729552 (-)	29,892 bp
Tssr109926	Chr11:86719286-86719297 (-)	40,150 bp