Gm34091 Pseudogene Detail

Summary

• Symbol
  Gm34091
• Name
  predicted gene, 34091
• Synonyms
  Gm43632

• Feature Type
  pseudogene
• IDs
  MGI:5593250
  NCBI Gene: 102637222
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:127388093-127388696 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593250	pseudogene	Chr6:127387909-127388731 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013711	pseudogene	Chr6:130917652-130919301 (+)
A/J	MGP_AJ_G0013697	pseudogene	Chr6:125935108-125935691 (+)
AKR/J	MGP_AKRJ_G0013659	pseudogene	Chr6:129335789-129336374 (+)
BALB/cJ	MGP_BALBcJ_G0013675	pseudogene	Chr6:125490031-125492057 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014062	pseudogene	Chr6:134341266-134343077 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012045	pseudogene	Chr6:123107552-123108151 (+)
CAST/EiJ	MGP_CASTEiJ_G0013207	pseudogene	Chr6:129677448-129680439 (+)
CBA/J	MGP_CBAJ_G0013490	pseudogene	Chr6:139498578-139501986 (+)
DBA/2J	MGP_DBA2J_G0013571	pseudogene	Chr6:124822917-124823945 (+)
FVB/NJ	MGP_FVBNJ_G0013569	pseudogene	Chr6:123750084-123750699 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0013584	pseudogene	Chr6:143441790-143442411 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0012793	pseudogene	Chr6:127393813-127401408 (+)
WSB/EiJ	MGP_WSBEiJ_G0013261	pseudogene	Chr6:129670165-129671766 (+)

Homology

• Gene Tree
  Gm34091
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000106883 (Evidence)
• NCBI Gene
  102637222

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106883	Ensembl Gene Model | MGI Sequence Detail	604	C57BL/6J
transcript	ENSMUST00000200875	Ensembl | MGI Sequence Detail	604	Not Applicable

Other
Accession IDs

MGI:5663769

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;