Gm34312 Gene Detail

Summary

• Symbol
  Gm34312
• Name
  predicted gene, 34312
• Synonyms
  Gm44201

• Feature Type
  lncRNA gene
• IDs
  MGI:5593471
  NCBI Gene: 102637526
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:87574539-87575893 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593471	lncRNA gene	Chr6:87574539-87576169 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007010	lincRNA gene	Chr6:88953967-88955406 (+)
A/J	MGP_AJ_G0007006	lincRNA gene	Chr6:85516643-85518082 (+)
AKR/J	MGP_AKRJ_G0006974	lincRNA gene	Chr6:87992047-87993487 (+)
BALB/cJ	MGP_BALBcJ_G0006982	lincRNA gene	Chr6:85516199-85517639 (+)
C3H/HeJ	MGP_C3HHeJ_G0006943	lincRNA gene	Chr6:96477373-96478812 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007146	lincRNA gene	Chr6:91335045-91336485 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006382	lincRNA gene	Chr6:83696422-83697923 (+)
CAST/EiJ	MGP_CASTEiJ_G0006839	lincRNA gene	Chr6:88072081-88073536 (+)
CBA/J	MGP_CBAJ_G0006907	lincRNA gene	Chr6:94872155-94873594 (+)
DBA/2J	MGP_DBA2J_G0006927	lincRNA gene	Chr6:84821226-84822665 (+)
FVB/NJ	MGP_FVBNJ_G0006951	lincRNA gene	Chr6:84003783-84005222 (+)
LP/J	MGP_LPJ_G0007013	lincRNA gene	Chr6:88974359-88975798 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006931	lincRNA gene	Chr6:99016427-99017866 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007151	lincRNA gene	Chr6:87835580-87837021 (+)
PWK/PhJ	MGP_PWKPhJ_G0006778	lincRNA gene	Chr6:83784507-83785954 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006688	lincRNA gene	Chr6:86646760-86648198 (+)
WSB/EiJ	MGP_WSBEiJ_G0006896	lincRNA gene	Chr6:88297335-88298775 (+)

Homology

• Gene Tree
  Gm34312
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm34312
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000108118 (Evidence)
• NCBI Gene
  102637526

Representative Sequences			Length	Strain/Species
genomic	102637526	NCBI Gene Model | MGI Sequence Detail	1355	C57BL/6J
transcript	AK048295	GenBank | ENA | DDBJ | MGI Sequence Detail	1093	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5690593

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)