Gm34599 Gene Detail

Summary

• Symbol
  Gm34599
• Name
  predicted gene, 34599
• Synonyms
  Gm43208

• Feature Type
  lncRNA gene
• IDs
  MGI:5593758
  NCBI Gene: 102637903
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:34470644-34472311 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593758	lncRNA gene	Chr3:34469904-34472311 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006149	lincRNA gene	Chr3:32086626-32088293 (+)
A/J	MGP_AJ_G0006141	lincRNA gene	Chr3:31572349-31574016 (+)
AKR/J	MGP_AKRJ_G0006117	lincRNA gene	Chr3:32109695-32111362 (+)
BALB/cJ	MGP_BALBcJ_G0006118	lincRNA gene	Chr3:31224695-31226362 (+)
C3H/HeJ	MGP_C3HHeJ_G0006067	lincRNA gene	Chr3:32156500-32158167 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006279	lincRNA gene	Chr3:33674589-33676256 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005592	lincRNA gene	Chr3:29342303-29343966 (+)
CAST/EiJ	MGP_CASTEiJ_G0006002	lincRNA gene	Chr3:31994979-31996647 (+)
CBA/J	MGP_CBAJ_G0006052	lincRNA gene	Chr3:34545318-34546985 (+)
DBA/2J	MGP_DBA2J_G0006072	lincRNA gene	Chr3:31050014-31051681 (+)
FVB/NJ	MGP_FVBNJ_G0006095	lincRNA gene	Chr3:30498059-30499725 (+)
LP/J	MGP_LPJ_G0006153	lincRNA gene	Chr3:32858843-32860510 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006085	lincRNA gene	Chr3:37042236-37043903 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006283	lincRNA gene	Chr3:31902174-31905109 (+)
PWK/PhJ	MGP_PWKPhJ_G0005947	lincRNA gene	Chr3:30617996-30619665 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005856	lincRNA gene	Chr3:31316159-31317823 (+)
WSB/EiJ	MGP_WSBEiJ_G0006049	lincRNA gene	Chr3:31931076-31932742 (+)

Homology

• Gene Tree
  Gm34599
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105577 (Evidence)
• NCBI Gene
  102637903

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105577	Ensembl Gene Model | MGI Sequence Detail	1668	C57BL/6J
transcript	ENSMUST00000198924	Ensembl | MGI Sequence Detail	288	Not Applicable

Other
Accession IDs

MGI:5663345

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;