Gm34701 Gene Detail

Summary

• Symbol
  Gm34701
• Name
  predicted gene, 34701
• Synonyms
  Gm44222

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5593860
  NCBI Gene: 102638036
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:42083042-42083401 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593860	lncRNA gene	Chr6:42082724-42091455 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039736	pseudogene	Chr6:40618206-40619054 (-)
A/J	MGP_AJ_G0039738	pseudogene	Chr6:38840984-38841832 (-)
AKR/J	MGP_AKRJ_G0039662	pseudogene	Chr6:40119097-40119945 (-)
BALB/cJ	MGP_BALBcJ_G0039706	pseudogene	Chr6:39072466-39073314 (-)
C3H/HeJ	MGP_C3HHeJ_G0039368	pseudogene	Chr6:40128411-40129259 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040268	pseudogene	Chr6:41629902-41637513 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036895	pseudogene	Chr6:36743404-36744223 (-)
CAST/EiJ	MGP_CASTEiJ_G0038486	pseudogene	Chr6:40001450-40002297 (-)
CBA/J	MGP_CBAJ_G0039340	pseudogene	Chr6:43343088-43345888 (-)
DBA/2J	MGP_DBA2J_G0039533	pseudogene	Chr6:38697156-38698004 (-)
FVB/NJ	MGP_FVBNJ_G0039491	pseudogene	Chr6:38444424-38445270 (-)
LP/J	MGP_LPJ_G0039571	pseudogene	Chr6:40580557-40581405 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039493	pseudogene	Chr6:45602577-45603425 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040369	pseudogene	Chr6:40068405-40069253 (-)
PWK/PhJ	MGP_PWKPhJ_G0038160	pseudogene	Chr6:38269082-38269930 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037908	pseudogene	Chr6:39659781-39660633 (+)
WSB/EiJ	MGP_WSBEiJ_G0038720	pseudogene	Chr6:40088886-40089732 (-)

Homology

• Gene Tree
  Gm34701
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000107543 (Evidence)
• NCBI Gene
  102638036

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107543	Ensembl Gene Model | MGI Sequence Detail	360	C57BL/6J
transcript	ENSMUST00000204685	Ensembl | MGI Sequence Detail	360	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5690614

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;