Gm35065 Gene Detail

Summary

• Symbol
  Gm35065
• Name
  predicted gene, 35065
• Synonyms
  Gm43591

• Feature Type
  lncRNA gene
• IDs
  MGI:5594224
  NCBI Gene: 102638522
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:123237977-123241096 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594224	lncRNA gene	Chr3:123230445-123241096 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003829	antisense lncRNA gene	Chr3:125754547-125757666 (-)
A/J	MGP_AJ_G0003809	antisense lncRNA gene	Chr3:121544813-121547932 (-)
AKR/J	MGP_AKRJ_G0003785	antisense lncRNA gene	Chr3:124646326-124649445 (-)
BALB/cJ	MGP_BALBcJ_G0003796	antisense lncRNA gene	Chr3:121355087-121358206 (-)
C3H/HeJ	MGP_C3HHeJ_G0003743	antisense lncRNA gene	Chr3:125042763-125045882 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003938	antisense lncRNA gene	Chr3:130307590-130310709 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003441	antisense lncRNA gene	Chr3:116963771-116966924 (-)
CAST/EiJ	MGP_CASTEiJ_G0003707	antisense lncRNA gene	Chr3:124459145-124462272 (-)
CBA/J	MGP_CBAJ_G0003737	antisense lncRNA gene	Chr3:134708636-134711755 (-)
DBA/2J	MGP_DBA2J_G0003749	antisense lncRNA gene	Chr3:120676444-120679563 (-)
FVB/NJ	MGP_FVBNJ_G0003770	antisense lncRNA gene	Chr3:118296890-118300009 (-)
LP/J	MGP_LPJ_G0003831	antisense lncRNA gene	Chr3:127288704-127291823 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003757	antisense lncRNA gene	Chr3:142288579-142291698 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003939	antisense lncRNA gene	Chr3:124215210-124218329 (-)
PWK/PhJ	MGP_PWKPhJ_G0003663	antisense lncRNA gene	Chr3:120420501-120423620 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003607	antisense lncRNA gene	Chr3:122321841-122324962 (-)
WSB/EiJ	MGP_WSBEiJ_G0003743	antisense lncRNA gene	Chr3:124966072-124969200 (-)

Homology

• Gene Tree
  Gm35065
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35065
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  4

• Ensembl
  ENSMUSG00000105784 (Evidence)
• NCBI Gene
  102638522

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105784	Ensembl Gene Model | MGI Sequence Detail	3120	C57BL/6J
transcript	ENSMUST00000199206	Ensembl | MGI Sequence Detail	428	Not Applicable

Other
Accession IDs

MGI:5663728

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;