Gm35510 Gene Detail

Summary

• Symbol
  Gm35510
• Name
  predicted gene, 35510

• Feature Type
  lncRNA gene
• IDs
  MGI:5594669
  NCBI Gene: 102639122
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:118930198-118941543 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  447 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594669	lncRNA gene	Chr4:118929277-118941597 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm35510
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  12 phenotype references
  

• All Mutations and Alleles
  202
• Chemically induced (other)
  2
• Gene trapped
  198
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Gm35510
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  2

• Ensembl
  ENSMUSG00000120044 (Evidence)
• NCBI Gene
  102639122

Representative Sequences			Length	Strain/Species
genomic	102639122	NCBI Gene Model | MGI Sequence Detail	11346	C57BL/6J
transcript	XR_868067	RefSeq | MGI Sequence Detail	439	C57BL/6J

References

• Summaries
  All 15

  Phenotypes 12
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

TSS for Gm35510:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38694	Chr4:118929275-118929286 (+)	-917 bp