Gm35611 Gene Detail

Summary

• Symbol
  Gm35611
• Name
  predicted gene, 35611
• Synonyms
  Gm45097

• Feature Type
  lncRNA gene
• IDs
  MGI:5594770
  NCBI Gene: 102639258
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:34786261-34790267 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  187 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594770	lncRNA gene	Chr7:34785541-34797395 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007146	lincRNA gene	Chr7:34436126-34442026 (+)
A/J	MGP_AJ_G0007142	lincRNA gene	Chr7:33538687-33542669 (+)
AKR/J	MGP_AKRJ_G0007112	lincRNA gene	Chr7:34336446-34340427 (+)
BALB/cJ	MGP_BALBcJ_G0007120	lincRNA gene	Chr7:33829197-33833173 (+)
C3H/HeJ	MGP_C3HHeJ_G0007064	lincRNA gene	Chr7:35231540-35236747 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007285	lincRNA gene	Chr7:36140602-36144578 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006506	lincRNA gene	Chr7:34258742-34262799 (+)
CAST/EiJ	MGP_CASTEiJ_G0006968	lincRNA gene	Chr7:26372359-26376331 (+)
CBA/J	MGP_CBAJ_G0007046	lincRNA gene	Chr7:37278675-37285062 (+)
DBA/2J	MGP_DBA2J_G0007067	lincRNA gene	Chr7:33378279-33382248 (+)
FVB/NJ	MGP_FVBNJ_G0007090	lincRNA gene	Chr7:33309377-33313337 (+)
LP/J	MGP_LPJ_G0007150	lincRNA gene	Chr7:34773309-34778383 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007069	lincRNA gene	Chr7:36298553-36303953 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007290	lincRNA gene	Chr7:33875035-33880364 (+)
PWK/PhJ	MGP_PWKPhJ_G0006910	lincRNA gene	Chr7:26708619-26713943 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006821	lincRNA gene	Chr7:23461156-23465138 (+)
WSB/EiJ	MGP_WSBEiJ_G0007029	lincRNA gene	Chr7:34431243-34435213 (+)

Homology

• Gene Tree
  Gm35611
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  5

• Ensembl
  ENSMUSG00000108657 (Evidence)
• NCBI Gene
  102639258

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108657	Ensembl Gene Model | MGI Sequence Detail	4007	C57BL/6J
transcript	ENSMUST00000205323	Ensembl | MGI Sequence Detail	799	Not Applicable

Other
Accession IDs

MGI:5753673

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;