Gm36241 Gene Detail

Summary

• Symbol
  Gm36241
• Name
  predicted gene, 36241
• Synonyms
  Gm43451

• Feature Type
  lncRNA gene
• IDs
  MGI:5595400
  NCBI Gene: 102640087
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:149832758-149834937 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595400	lncRNA gene	Chr5:149826662-149834937 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015621	unclassified non-coding RNA gene	Chr5:155790614-155798514 (+)
A/J	MGP_AJ_G0015597	unclassified non-coding RNA gene	Chr5:149126622-149134534 (+)
AKR/J	MGP_AKRJ_G0015561	unclassified non-coding RNA gene	Chr5:153726772-153734691 (+)
BALB/cJ	MGP_BALBcJ_G0015559	unclassified non-coding RNA gene	Chr5:150383186-150391098 (+)
C3H/HeJ	MGP_C3HHeJ_G0015381	unclassified non-coding RNA gene	Chr5:154719937-154727849 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016013	unclassified non-coding RNA gene	Chr5:161483928-161491845 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013747	unclassified non-coding RNA gene	Chr5:143473591-143481359 (+)
CAST/EiJ	MGP_CASTEiJ_G0014937	unclassified non-coding RNA gene	Chr5:154356325-154365633 (+)
CBA/J	MGP_CBAJ_G0015362	unclassified non-coding RNA gene	Chr5:168302492-168310409 (+)
DBA/2J	MGP_DBA2J_G0015456	unclassified non-coding RNA gene	Chr5:148774562-148782479 (+)
FVB/NJ	MGP_FVBNJ_G0015463	unclassified non-coding RNA gene	Chr5:148027269-148035181 (+)
LP/J	MGP_LPJ_G0015537	unclassified non-coding RNA gene	Chr5:156467268-156475168 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015486	unclassified non-coding RNA gene	Chr5:170373403-170381315 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016055	unclassified non-coding RNA gene	Chr5:153674955-153682872 (+)
PWK/PhJ	MGP_PWKPhJ_G0014722	unclassified non-coding RNA gene	Chr5:147945373-147953155 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014510	unclassified non-coding RNA gene	Chr5:150970970-150978834 (+)
WSB/EiJ	MGP_WSBEiJ_G0015041	unclassified non-coding RNA gene	Chr5:154484438-154492350 (+)

Homology

• Gene Tree
  Gm36241
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000107112 (Evidence)
• NCBI Gene
  102640087

Representative Sequences			Length	Strain/Species
genomic	102640087	NCBI Gene Model | MGI Sequence Detail	2180	C57BL/6J
transcript	XR_377277	RefSeq | MGI Sequence Detail	1267	C57BL/6J

Other
Accession IDs

MGI:5663588

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;