Gm36307 Gene Detail

Summary

• Symbol
  Gm36307
• Name
  predicted gene, 36307

• Feature Type
  lncRNA gene
• IDs
  MGI:5595466
  NCBI Gene: 102640178
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:175401875-175405991 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595466	lncRNA gene	Chr1:175401875-175405991 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005041	lincRNA gene	Chr1:181671515-181675619 (+)
A/J	MGP_AJ_G0005023	lincRNA gene	Chr1:174344070-174348180 (+)
AKR/J	MGP_AKRJ_G0005001	lincRNA gene	Chr1:179561076-179565196 (+)
BALB/cJ	MGP_BALBcJ_G0005005	lincRNA gene	Chr1:174885562-174889678 (+)
C3H/HeJ	MGP_C3HHeJ_G0004953	lincRNA gene	Chr1:180172045-180176181 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005155	lincRNA gene	Chr1:187664895-187668844 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0004901	lincRNA gene	Chr1:179531421-179536589 (+)
CBA/J	MGP_CBAJ_G0004944	lincRNA gene	Chr1:194518286-194522402 (+)
DBA/2J	MGP_DBA2J_G0004963	lincRNA gene	Chr1:173205512-173209919 (+)
FVB/NJ	MGP_FVBNJ_G0004984	lincRNA gene	Chr1:171330533-171334641 (+)
LP/J	MGP_LPJ_G0005041	lincRNA gene	Chr1:182868530-182872646 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004968	lincRNA gene	Chr1:201764745-201769385 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005160	lincRNA gene	Chr1:179333819-179337891 (+)
PWK/PhJ	MGP_PWKPhJ_G0004852	lincRNA gene	Chr1:172293843-172298025 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004778	lincRNA gene	Chr1:178368549-178372643 (+)
WSB/EiJ	MGP_WSBEiJ_G0004947	lincRNA gene	Chr1:179530628-179534677 (+)

Homology

• Gene Tree
  Gm36307
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm36307
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000103079 (Evidence)
• NCBI Gene
  102640178

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103079	Ensembl Gene Model | MGI Sequence Detail	4117	C57BL/6J
transcript	ENSMUST00000195831	Ensembl | MGI Sequence Detail	953	Not Applicable

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;