Gm36328 Gene Detail

Summary

• Symbol
  Gm36328
• Name
  predicted gene, 36328
• Synonyms
  Gm44025

• Feature Type
  lncRNA gene
• IDs
  MGI:5595487
  NCBI Gene: 102640204
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:134731209-134732155 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595487	lncRNA gene	Chr6:134730843-134732162 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004374	antisense lncRNA gene	Chr6:139033480-139034426 (+)
A/J	MGP_AJ_G0004351	antisense lncRNA gene	Chr6:133587445-133588395 (+)
AKR/J	MGP_AKRJ_G0004333	antisense lncRNA gene	Chr6:137633955-137634905 (+)
BALB/cJ	MGP_BALBcJ_G0004337	antisense lncRNA gene	Chr6:133400290-133401240 (+)
C3H/HeJ	MGP_C3HHeJ_G0004286	antisense lncRNA gene	Chr6:137681696-137682646 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004487	antisense lncRNA gene	Chr6:142815694-142816695 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003947	antisense lncRNA gene	Chr6:132726884-132727788 (+)
CAST/EiJ	MGP_CASTEiJ_G0004246	antisense lncRNA gene	Chr6:137083565-137084516 (+)
CBA/J	MGP_CBAJ_G0004280	antisense lncRNA gene	Chr6:148138810-148139760 (+)
DBA/2J	MGP_DBA2J_G0004295	antisense lncRNA gene	Chr6:132437839-132438683 (+)
FVB/NJ	MGP_FVBNJ_G0004312	antisense lncRNA gene	Chr6:131350385-131351335 (+)
LP/J	MGP_LPJ_G0004374	antisense lncRNA gene	Chr6:139144356-139146346 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004303	antisense lncRNA gene	Chr6:152179212-152180128 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004484	antisense lncRNA gene	Chr6:137380065-137381015 (+)
PWK/PhJ	MGP_PWKPhJ_G0004199	antisense lncRNA gene	Chr6:130923872-130924822 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004141	antisense lncRNA gene	Chr6:135545293-135546249 (+)
WSB/EiJ	MGP_WSBEiJ_G0004285	antisense lncRNA gene	Chr6:138006457-138007407 (+)

Homology

• Gene Tree
  Gm36328
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108196 (Evidence)
• NCBI Gene
  102640204

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108196	Ensembl Gene Model | MGI Sequence Detail	947	C57BL/6J
transcript	ENSMUST00000204237	Ensembl | MGI Sequence Detail	432	Not Applicable

Other
Accession IDs

MGI:5690417

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;