Gm36388 Gene Detail

Summary

• Symbol
  Gm36388
• Name
  predicted gene, 36388

• Feature Type
  lncRNA gene
• IDs
  MGI:5595547
  NCBI Gene: 102640278
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:187253880-187323244 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1909 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595547	lncRNA gene	Chr1:187253880-187323244 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002817	antisense lncRNA gene	Chr1:194440558-194478452 (-)
A/J	MGP_AJ_G0002794	antisense lncRNA gene	Chr1:186479570-186514090 (-)
AKR/J	MGP_AKRJ_G0002775	antisense lncRNA gene	Chr1:191973380-192009485 (-)
BALB/cJ	MGP_BALBcJ_G0002781	antisense lncRNA gene	Chr1:187159663-187194335 (-)
C3H/HeJ	MGP_C3HHeJ_G0002739	antisense lncRNA gene	Chr1:192837865-192873435 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002923	antisense lncRNA gene	Chr1:200652002-200688098 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002470	antisense lncRNA gene	Chr1:177458521-177493521 (-)
CAST/EiJ	MGP_CASTEiJ_G0002711	antisense lncRNA gene	Chr1:192355950-192391125 (-)
CBA/J	MGP_CBAJ_G0002734	antisense lncRNA gene	Chr1:208126378-208172612 (-)
DBA/2J	MGP_DBA2J_G0002741	antisense lncRNA gene	Chr1:185237741-185273466 (-)
FVB/NJ	MGP_FVBNJ_G0002761	antisense lncRNA gene	Chr1:183340429-183377084 (-)
LP/J	MGP_LPJ_G0002817	antisense lncRNA gene	Chr1:195612107-195647505 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002751	antisense lncRNA gene	Chr1:214926052-214962066 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002928	antisense lncRNA gene	Chr1:191885818-191920284 (-)
PWK/PhJ	MGP_PWKPhJ_G0002669	antisense lncRNA gene	Chr1:184461104-184497029 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002619	antisense lncRNA gene	Chr1:190834727-190872924 (-)
WSB/EiJ	MGP_WSBEiJ_G0002740	antisense lncRNA gene	Chr1:192053767-192092048 (-)

Expression

• cDNA Data
  1

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• NCBI Gene
  102640278

Representative Sequences			Length	Strain/Species
genomic	102640278	NCBI Gene Model | MGI Sequence Detail	69365	C57BL/6J
transcript	AK046063	GenBank | ENA | DDBJ | MGI Sequence Detail	1676	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;