Gm36536 Gene Detail

Summary

• Symbol
  Gm36536
• Name
  predicted gene, 36536

• Feature Type
  lncRNA gene
• IDs
  MGI:5595695
  NCBI Gene: 102640488
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:176257677-176354835 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3507 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595695	lncRNA gene	Chr1:176257677-176354839 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005043	lincRNA gene	Chr1:182569701-182674392 (-)
A/J	MGP_AJ_G0005025	lincRNA gene	Chr1:175207708-175305415 (-)
AKR/J	MGP_AKRJ_G0005003	lincRNA gene	Chr1:180450820-180552503 (-)
BALB/cJ	MGP_BALBcJ_G0005007	lincRNA gene	Chr1:175742886-175840551 (-)
C3H/HeJ	MGP_C3HHeJ_G0004955	lincRNA gene	Chr1:181061320-181166778 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005157	lincRNA gene	Chr1:188578652-188687529 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004566	lincRNA gene	Chr1:166513272-166606887 (-)
CAST/EiJ	MGP_CASTEiJ_G0004903	lincRNA gene	Chr1:180414878-180514439 (-)
CBA/J	MGP_CBAJ_G0004946	lincRNA gene	Chr1:195435639-195555162 (-)
DBA/2J	MGP_DBA2J_G0004965	lincRNA gene	Chr1:174060087-174160488 (-)
FVB/NJ	MGP_FVBNJ_G0004986	lincRNA gene	Chr1:172171354-172267866 (-)
LP/J	MGP_LPJ_G0005043	lincRNA gene	Chr1:183766928-183864633 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004970	lincRNA gene	Chr1:202681134-202793525 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005162	lincRNA gene	Chr1:180211177-180307773 (-)
PWK/PhJ	MGP_PWKPhJ_G0004854	lincRNA gene	Chr1:173151852-173248906 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004780	lincRNA gene	Chr1:179254434-179367851 (-)
WSB/EiJ	MGP_WSBEiJ_G0004949	lincRNA gene	Chr1:180406586-180512869 (-)

Homology

• Gene Tree
  Gm36536
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm36536
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000104021 (Evidence)
• NCBI Gene
  102640488

Representative Sequences			Length	Strain/Species
genomic	102640488	NCBI Gene Model | MGI Sequence Detail	97159	C57BL/6J
transcript	NR_151528	RefSeq | MGI Sequence Detail	955	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;