Gm36587 Gene Detail

Summary

• Symbol
  Gm36587
• Name
  predicted gene, 36587

• Feature Type
  lncRNA gene
• IDs
  MGI:5595746
  NCBI Gene: 102640551
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr16:91162373-91176210 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  373 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595746	lncRNA gene	Chr16:91130921-91176210 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm36587
  

Human Diseases

• References
  4 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  68 phenotype references
  

• All Mutations and Alleles
  7
• Gene trapped
  2
• Spontaneous
  1
• Targeted
  3
• Genomic Mutations
  5 involving Gm36587
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  3

• Ensembl
  ENSMUSG00000120333 (Evidence)
• NCBI Gene
  102640551

Representative Sequences			Length	Strain/Species
genomic	102640551	NCBI Gene Model | MGI Sequence Detail	13838	C57BL/6J
transcript	KY467761	GenBank | ENA | DDBJ | MGI Sequence Detail	749	ZRU/MplStud

References

• Summaries
  All 71

  Diseases 4

  Phenotypes 68
• Earliest
  J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
• Latest
  J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077

TSS for Gm36587:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr142082	Chr16:91169987-91169999 (-)	6,217 bp
Tssr142081	Chr16:91169562-91169587 (-)	6,635 bp
Tssr142080	Chr16:91164002-91164055 (-)	12,181 bp