Gm36600 Gene Detail

Summary

• Symbol
  Gm36600
• Name
  predicted gene, 36600

• Feature Type
  lncRNA gene
• IDs
  MGI:5595759
  NCBI Gene: 102640566
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:150789593-150823587 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1135 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595759	lncRNA gene	Chr4:150789593-150823587 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm36600
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  9
• RefSeq
  7

• NCBI Gene
  102640566

Representative Sequences			Length	Strain/Species
genomic	102640566	NCBI Gene Model | MGI Sequence Detail	33995	C57BL/6J
transcript	XR_390969	RefSeq | MGI Sequence Detail	2840	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8

TSS for Gm36600:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr40437	Chr4:150789662-150789673 (+)	75 bp
Tssr40438	Chr4:150795329-150795333 (+)	5,738 bp