Gm36669 Gene Detail

Summary

• Symbol
  Gm36669
• Name
  predicted gene, 36669

• Feature Type
  lncRNA gene
• IDs
  MGI:5595828
  NCBI Gene: 102640655
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:16777523-16788511 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  451 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595828	lncRNA gene	Chr6:16777523-16788819 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006906	lincRNA gene	Chr6:13974278-13989248 (+)
A/J	MGP_AJ_G0006900	lincRNA gene	Chr6:13428397-13439685 (+)
AKR/J	MGP_AKRJ_G0006870	lincRNA gene	Chr6:13911138-13922420 (+)
BALB/cJ	MGP_BALBcJ_G0006876	lincRNA gene	Chr6:13515149-13526236 (+)
C3H/HeJ	MGP_C3HHeJ_G0006821	lincRNA gene	Chr6:13755808-13768225 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007041	lincRNA gene	Chr6:14440430-14452842 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006289	lincRNA gene	Chr6:12417832-12429363 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0006803	lincRNA gene	Chr6:14888500-14904317 (+)
DBA/2J	MGP_DBA2J_G0006823	lincRNA gene	Chr6:13359661-13370477 (+)
FVB/NJ	MGP_FVBNJ_G0006846	lincRNA gene	Chr6:13201141-13212304 (+)
LP/J	MGP_LPJ_G0006906	lincRNA gene	Chr6:14078410-14091546 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0007043	lincRNA gene	Chr6:13780399-13791663 (+)
PWK/PhJ	MGP_PWKPhJ_G0006681	lincRNA gene	Chr6:13006103-13017206 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006589	lincRNA gene	Chr6:13618809-13632496 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm36669
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000107022 (Evidence)
• NCBI Gene
  102640655

Representative Sequences			Length	Strain/Species
genomic	102640655	NCBI Gene Model | MGI Sequence Detail	10989	C57BL/6J
transcript	NR_157239	RefSeq | MGI Sequence Detail	3342	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;