Gm36753 Gene Detail

Summary

• Symbol
  Gm36753
• Name
  predicted gene, 36753

• Feature Type
  lncRNA gene
• IDs
  MGI:5595912
  NCBI Gene: 102640761
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr3:131196077-131204214 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  340 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595912	lncRNA gene	Chr3:131196077-131204939 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm36753
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36753
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  2

• Ensembl
  ENSMUSG00000142279 (Evidence)
• NCBI Gene
  102640761

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000142279	Ensembl Gene Model | MGI Sequence Detail	8138	C57BL/6J
transcript	ENSMUST00000370037	Ensembl | MGI Sequence Detail	1196	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm36753:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr1055	Chr3:131195473-131195490 (+)	-595 bp
Tssr31735	Chr3:131195498-131195514 (+)	-571 bp
Tssr1056	Chr3:131195766-131195792 (+)	-298 bp
Tssr31736	Chr3:131196112-131196166 (+)	62 bp
Tssr31737	Chr3:131197320-131197329 (+)	1,248 bp
Tssr31738	Chr3:131202665-131202671 (+)	6,591 bp