Gm36914 Gene Detail

Summary

• Symbol
  Gm36914
• Name
  predicted gene, 36914

• Feature Type
  lncRNA gene
• IDs
  MGI:5596073
  NCBI Gene: 102640981
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:32937510-32953023 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  510 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5596073	lncRNA gene	Chr19:32937510-32976613 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm36914
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  2

• Ensembl
  ENSMUSG00000120097 (Evidence)
• NCBI Gene
  102640981

Representative Sequences			Length	Strain/Species
genomic	102640981	NCBI Gene Model | MGI Sequence Detail	15514	C57BL/6J
transcript	XR_877816	RefSeq | MGI Sequence Detail	405	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm36914:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr156008	Chr19:32937530-32937571 (+)	41 bp
Tssr156009	Chr19:32952947-32952951 (+)	15,439 bp