Gm37170 Gene Detail

Summary

• Symbol
  Gm37170
• Name
  predicted gene, 37170

• Feature Type
  lncRNA gene
• IDs
  MGI:5610398
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:52105669-52107910 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610398	lncRNA gene	Chr3:52105669-52107910 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006184	lincRNA gene	Chr3:50718860-50721099 (+)
A/J	MGP_AJ_G0006176	lincRNA gene	Chr3:49224097-49226338 (+)
AKR/J	MGP_AKRJ_G0006152	lincRNA gene	Chr3:50194320-50196561 (+)
BALB/cJ	MGP_BALBcJ_G0006152	lincRNA gene	Chr3:49082790-49085031 (+)
C3H/HeJ	MGP_C3HHeJ_G0006102	lincRNA gene	Chr3:50424754-50426995 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006315	lincRNA gene	Chr3:52734397-52736638 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005625	lincRNA gene	Chr3:45839702-45841929 (+)
CAST/EiJ	MGP_CASTEiJ_G0006037	lincRNA gene	Chr3:50504938-50507182 (+)
CBA/J	MGP_CBAJ_G0006087	lincRNA gene	Chr3:54379853-54382094 (+)
DBA/2J	MGP_DBA2J_G0006106	lincRNA gene	Chr3:48822472-48824712 (+)
FVB/NJ	MGP_FVBNJ_G0006130	lincRNA gene	Chr3:47802448-47804687 (+)
LP/J	MGP_LPJ_G0006189	lincRNA gene	Chr3:51470944-51473183 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006120	lincRNA gene	Chr3:58540102-58542343 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006319	lincRNA gene	Chr3:50128985-50131226 (+)
PWK/PhJ	MGP_PWKPhJ_G0005982	lincRNA gene	Chr3:48486308-48488543 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005891	lincRNA gene	Chr3:49788943-49791179 (+)
WSB/EiJ	MGP_WSBEiJ_G0006084	lincRNA gene	Chr3:50233491-50235732 (+)

Homology

• Gene Tree
  Gm37170
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm37170
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103170 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103170	Ensembl Gene Model | MGI Sequence Detail	2242	C57BL/6J
transcript	ENSMUST00000194488	Ensembl | MGI Sequence Detail	1934	Not Applicable

References

• Summaries
  All 6

  Phenotypes 5
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22