Gm37338 Gene Detail

Summary

• Symbol
  Gm37338
• Name
  predicted gene, 37338

• Feature Type
  unclassified gene
• IDs
  MGI:5610566
• Alliance
  gene page
• Transcription Start Sites
  8 TSS

Location &
Maps

• Sequence Map
  Chr3:3253093-3253219 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610566	unclassified gene	Chr3:3253093-3253219 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0001034	unclassified gene	Chr3:265499-265625 (+)
AKR/J	MGP_AKRJ_G0001019	unclassified gene	Chr3:40275-40401 (+)
BALB/cJ	MGP_BALBcJ_G0001026	unclassified gene	Chr3:1707-1833 (+)
C3H/HeJ	MGP_C3HHeJ_G0001008	unclassified gene	Chr3:277048-277174 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001140	unclassified gene	Chr3:285898-286024 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0000993	unclassified gene	Chr3:325869-325995 (+)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0001061	unclassified gene	Chr3:258349-258475 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001004	unclassified gene	Chr3:189676-189802 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0000950	unclassified gene	Chr3:262838-262964 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000926	unclassified gene	Chr3:172095-172221 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm37338
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12

• Ensembl
  ENSMUSG00000103416 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103416	Ensembl Gene Model | MGI Sequence Detail	127	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm37338:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28246	Chr3:3252984-3252997 (+)	-102 bp
Tssr28247	Chr3:3253052-3253057 (+)	-38 bp
Tssr28248	Chr3:3253076-3253108 (+)	-1 bp
Tssr28249	Chr3:3253117-3253126 (+)	29 bp
Tssr28250	Chr3:3253138-3253147 (+)	50 bp
Tssr28251	Chr3:3253160-3253165 (+)	70 bp
Tssr28252	Chr3:3253172-3253177 (+)	82 bp
Tssr28253	Chr3:3253184-3253192 (+)	95 bp