Gm37358 Pseudogene Detail

Summary

• Symbol
  Gm37358
• Name
  predicted gene, 37358

• Feature Type
  pseudogene
• IDs
  MGI:5610586
  NCBI Gene: 108168849
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:14448982-14449460 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610586	pseudogene	Chr3:14448982-14449460 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012037	pseudogene	Chr3:11484976-11485454 (-)
A/J	MGP_AJ_G0012028	pseudogene	Chr3:11499400-11499878 (-)
AKR/J	MGP_AKRJ_G0011988	pseudogene	Chr3:11481943-11482421 (-)
BALB/cJ	MGP_BALBcJ_G0012005	pseudogene	Chr3:11227374-11227852 (-)
C3H/HeJ	MGP_C3HHeJ_G0011883	pseudogene	Chr3:11807491-11807969 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012310	pseudogene	Chr3:12293610-12294088 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011663	pseudogene	Chr3:11838947-11839425 (-)
CBA/J	MGP_CBAJ_G0011855	pseudogene	Chr3:12487266-12487744 (-)
DBA/2J	MGP_DBA2J_G0011908	pseudogene	Chr3:11071666-11072144 (-)
FVB/NJ	MGP_FVBNJ_G0011918	pseudogene	Chr3:10894517-10894995 (-)
LP/J	MGP_LPJ_G0011985	pseudogene	Chr3:12073532-12074010 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011919	pseudogene	Chr3:14226346-14226824 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012317	pseudogene	Chr3:11312356-11312834 (-)
PWK/PhJ	MGP_PWKPhJ_G0011511	pseudogene	Chr3:11202096-11202574 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011326	pseudogene	Chr3:11372742-11373220 (-)
WSB/EiJ	MGP_WSBEiJ_G0011687	pseudogene	Chr3:11351688-11352166 (-)

Homology

• Gene Tree
  Gm37358
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103626 (Evidence)
• NCBI Gene
  108168849

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103626	Ensembl Gene Model | MGI Sequence Detail	479	C57BL/6J
transcript	ENSMUST00000195492	Ensembl | MGI Sequence Detail	479	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm37358:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32632	Chr3:14449490-14449508 (-)	-39 bp