Gm37401 Gene Detail

Summary

• Symbol
  Gm37401
• Name
  predicted gene, 37401

• Feature Type
  lncRNA gene
• IDs
  MGI:5610629
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:108214288-108215472 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610629	lncRNA gene	Chr9:108214288-108215472 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004695	antisense lncRNA gene	Chr9:110285645-110288575 (-)
A/J	MGP_AJ_G0003550	antisense lncRNA gene	Chr2:62159494-62159901 (+)
AKR/J	MGP_AKRJ_G0004071	antisense lncRNA gene	Chr5:88847144-88847449 (+)
BALB/cJ	MGP_BALBcJ_G0003539	antisense lncRNA gene	Chr2:62304728-62305038 (+)
C3H/HeJ	MGP_C3HHeJ_G0004025	antisense lncRNA gene	Chr5:89199295-89199600 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003677	antisense lncRNA gene	Chr2:66536435-66536759 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003509	antisense lncRNA gene	Chr4:48018747-48019070 (-)
CAST/EiJ	MGP_CASTEiJ_G0003988	antisense lncRNA gene	Chr5:88626585-88626904 (+)
CBA/J	MGP_CBAJ_G0004019	antisense lncRNA gene	Chr5:96287474-96287779 (+)
DBA/2J	MGP_DBA2J_G0004034	antisense lncRNA gene	Chr5:86085561-86085866 (+)
FVB/NJ	MGP_FVBNJ_G0003511	antisense lncRNA gene	Chr2:61202550-61202964 (+)
LP/J	MGP_LPJ_G0004699	antisense lncRNA gene	Chr9:110484275-110486322 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003499	antisense lncRNA gene	Chr2:71017201-71017525 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003680	antisense lncRNA gene	Chr2:63863166-63863489 (+)
PWK/PhJ	MGP_PWKPhJ_G0003941	antisense lncRNA gene	Chr5:85172923-85173242 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0004023	antisense lncRNA gene	Chr5:88759654-88759973 (+)

Homology

• Gene Tree
  Gm37401
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104208 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104208	Ensembl Gene Model | MGI Sequence Detail	1185	C57BL/6J
transcript	ENSMUST00000192053	Ensembl | MGI Sequence Detail	347	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;