Gm37996 Pseudogene Detail

Summary

• Symbol
  Gm37996
• Name
  predicted gene, 37996

• Feature Type
  pseudogene
• IDs
  MGI:5611224
  NCBI Gene: 108168848
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:12449303-12449669 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611224	pseudogene	Chr3:12449303-12454723 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012028	pseudogene	Chr3:9394682-9395048 (-)
A/J	MGP_AJ_G0012019	pseudogene	Chr3:9510760-9511126 (-)
AKR/J	MGP_AKRJ_G0011980	pseudogene	Chr3:9428912-9429278 (-)
BALB/cJ	MGP_BALBcJ_G0011996	pseudogene	Chr3:9204674-9205040 (-)
C3H/HeJ	MGP_C3HHeJ_G0011874	pseudogene	Chr3:9729755-9730121 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012301	pseudogene	Chr3:10137346-10137712 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010742	pseudogene	Chr3:8119100-8119469 (-)
CAST/EiJ	MGP_CASTEiJ_G0011656	pseudogene	Chr3:9805936-9806302 (-)
CBA/J	MGP_CBAJ_G0011847	pseudogene	Chr3:10262608-10262974 (-)
DBA/2J	MGP_DBA2J_G0011899	pseudogene	Chr3:9078854-9079220 (-)
FVB/NJ	MGP_FVBNJ_G0011909	pseudogene	Chr3:8930587-8930953 (-)
LP/J	MGP_LPJ_G0011976	pseudogene	Chr3:9950287-9950653 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011910	pseudogene	Chr3:11570123-11570489 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012308	pseudogene	Chr3:9285106-9285472 (-)
PWK/PhJ	MGP_PWKPhJ_G0011504	pseudogene	Chr3:9251703-9252069 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011319	pseudogene	Chr3:9371372-9371738 (-)
WSB/EiJ	MGP_WSBEiJ_G0011678	pseudogene	Chr3:9299597-9299963 (-)

Homology

• Gene Tree
  Gm37996
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000103339 (Evidence)
• NCBI Gene
  108168848

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103339	Ensembl Gene Model | MGI Sequence Detail	367	C57BL/6J
transcript	ENSMUST00000191859	Ensembl | MGI Sequence Detail	367	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;