Gm38071 Gene Detail

Summary

• Symbol
  Gm38071
• Name
  predicted gene, 38071

• Feature Type
  unclassified gene
• IDs
  MGI:5611299
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr16:77213512-77216889 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611299	unclassified gene	Chr16:77213512-77216889 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000920	unclassified gene	Chr16:77532101-77535554 (+)
A/J	MGP_AJ_G0000896	unclassified gene	Chr16:74110830-74114292 (+)
AKR/J	MGP_AKRJ_G0000884	unclassified gene	Chr16:76342837-76346214 (+)
BALB/cJ	MGP_BALBcJ_G0000889	unclassified gene	Chr16:74510201-74513573 (+)
C3H/HeJ	MGP_C3HHeJ_G0000872	unclassified gene	Chr16:76797328-76800699 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001004	unclassified gene	Chr16:80023628-80027002 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000737	unclassified gene	Chr16:72581123-72584528 (+)
CAST/EiJ	MGP_CASTEiJ_G0000864	unclassified gene	Chr16:77197091-77200508 (+)
CBA/J	MGP_CBAJ_G0000864	unclassified gene	Chr16:83440643-83444031 (+)
DBA/2J	MGP_DBA2J_G0000868	unclassified gene	Chr16:73954789-73958224 (+)
FVB/NJ	MGP_FVBNJ_G0000880	unclassified gene	Chr16:73318155-73321525 (+)
LP/J	MGP_LPJ_G0000923	unclassified gene	Chr16:77276567-77279956 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000872	unclassified gene	Chr16:86586958-86589994 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000998	unclassified gene	Chr16:76676278-76679672 (+)
PWK/PhJ	MGP_PWKPhJ_G0000818	unclassified gene	Chr16:74149918-74153818 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000791	unclassified gene	Chr16:76286554-76289931 (+)
WSB/EiJ	MGP_WSBEiJ_G0000872	unclassified gene	Chr16:76887893-76891271 (+)

Homology

• Gene Tree
  Gm38071
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm38071
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103916 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103916	Ensembl Gene Model | MGI Sequence Detail	3378	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:227899 Lana-Elola E, et al., Genetic dissection of Down syndrome-associated congenital heart defects using a new mouse mapping panel. Elife. 2016 Jan 14;5:e11614
• Latest
  J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077

TSS for Gm38071:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr139071	Chr16:77214494-77214533 (+)	1,002 bp
Tssr139072	Chr16:77216633-77216647 (+)	3,128 bp
Tssr139073	Chr16:77216733-77216737 (+)	3,223 bp