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Gm38102 Gene Detail
Summary
  • Symbol
    Gm38102
  • Name
    predicted gene, 38102
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5611330
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:123272002-123280241 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5611330
 lncRNA gene Chr5:123272002-123280241 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006800
 lincRNA gene Chr5:126820533-126824286 (+)
A/J MGP_AJ_G0006794
 lincRNA gene Chr5:121567396-121571149 (+)
AKR/J MGP_AKRJ_G0006764
 lincRNA gene Chr5:125483009-125486763 (+)
BALB/cJ MGP_BALBcJ_G0006770
 lincRNA gene Chr5:122901772-122905525 (+)
C3H/HeJ MGP_C3HHeJ_G0006715
 lincRNA gene Chr5:126100884-126105793 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006935
 lincRNA gene Chr5:131713983-131717747 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006190
 lincRNA gene Chr5:116150719-116154455 (+)
CAST/EiJ MGP_CASTEiJ_G0006638
 lincRNA gene Chr5:125211295-125215040 (+)
CBA/J MGP_CBAJ_G0006697
 lincRNA gene Chr5:136874776-136878530 (+)
DBA/2J MGP_DBA2J_G0006717
 lincRNA gene Chr5:121613410-121617165 (+)
FVB/NJ MGP_FVBNJ_G0006741
 lincRNA gene Chr5:120614757-120618507 (+)
LP/J MGP_LPJ_G0006801
 lincRNA gene Chr5:127355925-127359678 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006724
 lincRNA gene Chr5:140559451-140563205 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006937
 lincRNA gene Chr5:125078272-125084115 (+)
PWK/PhJ MGP_PWKPhJ_G0006577
 lincRNA gene Chr5:120402885-120404905 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006483
 lincRNA gene Chr5:122775618-122779350 (+)
WSB/EiJ MGP_WSBEiJ_G0006689
 lincRNA gene Chr5:125746888-125752870 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    33
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104156 Ensembl Gene Model | MGI Sequence Detail 8240 C57BL/6J ±  kb
transcript ENSMUST00000195992 Ensembl | MGI Sequence Detail 7354 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 8
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory