Gm38134 Gene Detail

Summary

• Symbol
  Gm38134
• Name
  predicted gene, 38134

• Feature Type
  lncRNA gene
• IDs
  MGI:5611362
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:107888175-107893807 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611362	lncRNA gene	Chr9:107888175-107893807 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004694	antisense lncRNA gene	Chr9:109928187-109937277 (-)
A/J	MGP_AJ_G0004675	antisense lncRNA gene	Chr9:105915244-105920421 (-)
AKR/J	MGP_AKRJ_G0004658	antisense lncRNA gene	Chr9:108555878-108561601 (-)
BALB/cJ	MGP_BALBcJ_G0004659	antisense lncRNA gene	Chr9:105586892-105601047 (-)
C3H/HeJ	MGP_C3HHeJ_G0004608	antisense lncRNA gene	Chr9:108953172-108959810 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004809	antisense lncRNA gene	Chr9:112900935-112910427 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004252	antisense lncRNA gene	Chr9:103348208-103354503 (-)
CAST/EiJ	MGP_CASTEiJ_G0004564	antisense lncRNA gene	Chr9:108913619-108920892 (-)
CBA/J	MGP_CBAJ_G0004602	antisense lncRNA gene	Chr9:116897542-116905692 (-)
DBA/2J	MGP_DBA2J_G0004617	antisense lncRNA gene	Chr9:105371474-105377300 (-)
FVB/NJ	MGP_FVBNJ_G0004635	antisense lncRNA gene	Chr9:104135175-104142560 (-)
LP/J	MGP_LPJ_G0004698	antisense lncRNA gene	Chr9:110121554-110129514 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004622	antisense lncRNA gene	Chr9:118491000-118497140 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004808	antisense lncRNA gene	Chr9:108834189-108841285 (-)
PWK/PhJ	MGP_PWKPhJ_G0004517	antisense lncRNA gene	Chr9:105692302-105697914 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004454	antisense lncRNA gene	Chr9:108897574-108904099 (-)
WSB/EiJ	MGP_WSBEiJ_G0004607	antisense lncRNA gene	Chr9:108713609-108719907 (-)

Homology

• Gene Tree
  Gm38134
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102540 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102540	Ensembl Gene Model | MGI Sequence Detail	5633	C57BL/6J
transcript	ENSMUST00000191858	Ensembl | MGI Sequence Detail	1234	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;