Gm38186 Gene Detail

Summary

• Symbol
  Gm38186
• Name
  predicted gene, 38186

• Feature Type
  lncRNA gene
• IDs
  MGI:5611414
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:59251692-59258588 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  310 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611414	lncRNA gene	Chr3:59251692-59258588 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003754	antisense lncRNA gene	Chr3:58219943-58227988 (+)
A/J	MGP_AJ_G0003734	antisense lncRNA gene	Chr3:56396072-56403913 (+)
AKR/J	MGP_AKRJ_G0003711	antisense lncRNA gene	Chr3:57571822-57580765 (+)
BALB/cJ	MGP_BALBcJ_G0003723	antisense lncRNA gene	Chr3:56203686-56210804 (+)
C3H/HeJ	MGP_C3HHeJ_G0003670	antisense lncRNA gene	Chr3:57787347-57794024 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003864	antisense lncRNA gene	Chr3:60370180-60377369 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003368	antisense lncRNA gene	Chr3:52756529-52763974 (+)
CAST/EiJ	MGP_CASTEiJ_G0003633	antisense lncRNA gene	Chr3:57968735-57975403 (+)
CBA/J	MGP_CBAJ_G0003666	antisense lncRNA gene	Chr3:62361732-62368732 (+)
DBA/2J	MGP_DBA2J_G0003675	antisense lncRNA gene	Chr3:55911086-55917738 (+)
FVB/NJ	MGP_FVBNJ_G0003696	antisense lncRNA gene	Chr3:54857982-54864650 (+)
LP/J	MGP_LPJ_G0003755	antisense lncRNA gene	Chr3:58972851-58979454 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003684	antisense lncRNA gene	Chr3:66513705-66525623 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003865	antisense lncRNA gene	Chr3:57546747-57554715 (+)
PWK/PhJ	MGP_PWKPhJ_G0003590	antisense lncRNA gene	Chr3:55546639-55553337 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003532	antisense lncRNA gene	Chr3:57246786-57253157 (+)
WSB/EiJ	MGP_WSBEiJ_G0003669	antisense lncRNA gene	Chr3:57623194-57629761 (+)

Homology

• Gene Tree
  Gm38186
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103668 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103668	Ensembl Gene Model | MGI Sequence Detail	6897	C57BL/6J
transcript	ENSMUST00000192574	Ensembl | MGI Sequence Detail	449	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;