Gm38235 Gene Detail

Summary

• Symbol
  Gm38235
• Name
  predicted gene, 38235

• Feature Type
  unclassified gene
• IDs
  MGI:5611463
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:106147044-106151995 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  222 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611463	unclassified gene	Chr1:106147044-106151995 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000547	unclassified gene	Chr1:108369814-108374766 (+)
A/J	MGP_AJ_G0000521	unclassified gene	Chr1:104575257-104580209 (+)
AKR/J	MGP_AKRJ_G0000510	unclassified gene	Chr1:107446537-107451489 (+)
BALB/cJ	MGP_BALBcJ_G0000513	unclassified gene	Chr1:104676946-104681898 (+)
C3H/HeJ	MGP_C3HHeJ_G0000500	unclassified gene	Chr1:107890442-107895394 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000630	unclassified gene	Chr1:112511431-112516382 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000379	unclassified gene	Chr1:98908871-98914070 (+)
CAST/EiJ	MGP_CASTEiJ_G0000494	unclassified gene	Chr1:106812809-106817795 (+)
CBA/J	MGP_CBAJ_G0000491	unclassified gene	Chr1:116355642-116360594 (+)
DBA/2J	MGP_DBA2J_G0000496	unclassified gene	Chr1:103647545-103652497 (+)
FVB/NJ	MGP_FVBNJ_G0000509	unclassified gene	Chr1:102590712-102595664 (+)
LP/J	MGP_LPJ_G0000553	unclassified gene	Chr1:109621712-109626664 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000506	unclassified gene	Chr1:120796222-120801174 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000623	unclassified gene	Chr1:107524873-107529825 (+)
PWK/PhJ	MGP_PWKPhJ_G0000446	unclassified gene	Chr1:102681040-102685981 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000423	unclassified gene	Chr1:106192385-106197353 (+)
WSB/EiJ	MGP_WSBEiJ_G0000498	unclassified gene	Chr1:107361108-107366060 (+)

Homology

• Gene Tree
  Gm38235
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103291 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103291	Ensembl Gene Model | MGI Sequence Detail	4952	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm38235:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8303	Chr1:106151632-106151639 (+)	4,592 bp