Gm38326 Gene Detail

Summary

• Symbol
  Gm38326
• Name
  predicted gene, 38326

• Feature Type
  lncRNA gene
• IDs
  MGI:5611554
  NCBI Gene: 102642162
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:60695782-60702149 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  306 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611554	lncRNA gene	Chr3:60695782-60702151 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006198	lincRNA gene	Chr3:59742013-59748495 (+)
A/J	MGP_AJ_G0006190	lincRNA gene	Chr3:57985731-57992097 (+)
AKR/J	MGP_AKRJ_G0006166	lincRNA gene	Chr3:59128919-59135283 (+)
BALB/cJ	MGP_BALBcJ_G0006166	lincRNA gene	Chr3:57723673-57730031 (+)
C3H/HeJ	MGP_C3HHeJ_G0006116	lincRNA gene	Chr3:59316195-59322550 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006329	lincRNA gene	Chr3:61993693-62000055 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005637	lincRNA gene	Chr3:54719252-54725613 (+)
CAST/EiJ	MGP_CASTEiJ_G0006050	lincRNA gene	Chr3:59521798-59528173 (+)
CBA/J	MGP_CBAJ_G0006101	lincRNA gene	Chr3:64041495-64047845 (+)
DBA/2J	MGP_DBA2J_G0006120	lincRNA gene	Chr3:57400839-57407208 (+)
FVB/NJ	MGP_FVBNJ_G0006144	lincRNA gene	Chr3:56289358-56295714 (+)
LP/J	MGP_LPJ_G0006203	lincRNA gene	Chr3:60585615-60591973 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006134	lincRNA gene	Chr3:68256702-68264623 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006333	lincRNA gene	Chr3:59037856-59044225 (+)
PWK/PhJ	MGP_PWKPhJ_G0005995	lincRNA gene	Chr3:57034696-57040990 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005904	lincRNA gene	Chr3:58638190-58644597 (+)
WSB/EiJ	MGP_WSBEiJ_G0006097	lincRNA gene	Chr3:59157067-59163439 (+)

Homology

• Gene Tree
  Gm38326
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm38326
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103587 (Evidence)
• NCBI Gene
  102642162

Representative Sequences			Length	Strain/Species
genomic	102642162	NCBI Gene Model | MGI Sequence Detail	6368	C57BL/6J
transcript	AK136176	GenBank | ENA | DDBJ | MGI Sequence Detail	686	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;