Gm38364 Pseudogene Detail

Summary

• Symbol
  Gm38364
• Name
  predicted gene, 38364

• Feature Type
  pseudogene
• IDs
  MGI:5611592
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:10374108-10374286 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611592	pseudogene	Chr3:10374108-10374286 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012022	pseudogene	Chr3:7289885-7290063 (+)
A/J	MGP_AJ_G0012014	pseudogene	Chr3:7440500-7440678 (+)
AKR/J	MGP_AKRJ_G0011975	pseudogene	Chr3:7349585-7349763 (+)
BALB/cJ	MGP_BALBcJ_G0011991	pseudogene	Chr3:7136116-7136294 (+)
C3H/HeJ	MGP_C3HHeJ_G0011869	pseudogene	Chr3:7646225-7646403 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012296	pseudogene	Chr3:7923095-7923273 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010736	pseudogene	Chr3:6319032-6319177 (+)
CAST/EiJ	MGP_CASTEiJ_G0011651	pseudogene	Chr3:7674154-7674332 (+)
CBA/J	MGP_CBAJ_G0011842	pseudogene	Chr3:7934776-7934954 (+)
DBA/2J	MGP_DBA2J_G0011895	pseudogene	Chr3:6999688-6999866 (+)
FVB/NJ	MGP_FVBNJ_G0011904	pseudogene	Chr3:6930836-6931014 (+)
LP/J	MGP_LPJ_G0011970	pseudogene	Chr3:7806232-7806410 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011905	pseudogene	Chr3:8962356-8962534 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012303	pseudogene	Chr3:7208708-7208886 (+)
PWK/PhJ	MGP_PWKPhJ_G0011498	pseudogene	Chr3:7232382-7232560 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011314	pseudogene	Chr3:7345932-7346110 (+)
WSB/EiJ	MGP_WSBEiJ_G0011672	pseudogene	Chr3:7236219-7236397 (+)

Homology

• Gene Tree
  Gm38364
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103592 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103592	Ensembl Gene Model | MGI Sequence Detail	179	C57BL/6J
transcript	ENSMUST00000191814	Ensembl | MGI Sequence Detail	179	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;