Gm38427 Gene Detail

Summary

• Symbol
  Gm38427
• Name
  predicted gene, 38427

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:5621312
  NCBI Gene: 100503831
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr8:70724995-70732566 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  238 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621312	unclassified non-coding RNA gene	Chr8:70724995-70732566 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  4

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  2

• NCBI Gene
  100503831

Representative Sequences			Length	Strain/Species
genomic	100503831	NCBI Gene Model | MGI Sequence Detail	7572	C57BL/6J
transcript	AK076954	GenBank | ENA | DDBJ | MGI Sequence Detail	447	C57BL/6J

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm38427:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr77723	Chr8:70727388-70727401 (+)	2,400 bp
Tssr2595	Chr8:70730723-70730736 (+)	5,735 bp
Tssr77724	Chr8:70730751-70730763 (+)	5,762 bp